drkarim Goto Github PK

3d-surface-to-surface-fusion-

ICP and transfer point data scalars between two VTK surfaces

ai_bibliography

Bibtex bibliography of AI articles on various fields including financial

covid-19

COVID19 Global Forecasting Challenge

data-engineer-resume-latex

A LaTeX resume template, tailored for the recent graduate who aspires to be a Data Scientist/Engineer.

dcmstack

DICOM to Nifti conversion with meta data preservation

dice-similarity-index-by-slice

Computes the mean Dice similarity index for each slice between masks in NIFTII, NRRD, GIPL formats

document-matching

Document Matching with Imaging Matching and Registration Techniques

drkarim.github.io

dsi-slice-based

Dice similarity index (DSI) to compute mean dice per slice using MIRTK

evaluatesegmentation

A program to evaluate the quality of image segmentations.

fann-neural-network-on-xor

Barebone MSVC example of using the C++ library for Fast Artificial Neural Network (FANN)

fltk-barebones

A barebone example of FLTK interface which compiles on MacOS Sierra

form-generator-for-ml

Synthesizes data to fill out PDF forms automatically - towards building datasets for OCR

function_learning

Deep learning experiments from Chollet's DL with Python

haralick-feature-extractor

Haralick Feature Extractor

horos

Horos™ is a free, open source medical image viewer. The goal of the Horos Project is to develop a fully functional, 64-bit medical image viewer for OS X. Horos is based upon OsiriX and other open source medical imaging libraries. Horos is made freely available under the GNU Lesser General Public License, Version 3 (LGPL-3.0). Horos is linked against the Grok JPEG 2000 library, for fast viewing of JPEG 2000 images. This library is licensed under the terms of the GNU Affero General Public License.

image-crop

Crop a binary image mask in 3D

imagerescaler

Rescale routines for 3D images

invert-transform-then-icp

Inverts a 4x4 landmark transformation, applies to VTK polydata and then performs affine ICP. Scalars are transferred

jellyfish

Streamlit app visualising data

keras

My Keras playground

la_lv_challenge_www

Website for data segmentation challenges

la_wall_mirtk

Segmentation for atrial wall from CT Angiography (with MIRTK)

lassy

A C++ library for 3D image investigation using surface normal profiles

launet

left-atrial-wall-from-ct

Segmentation of atrial wall using iterative dilation and intensity thresholding

liver-diseases-india

ILPD (Indian Liver Patient Dataset) Data Set - UCI

markdown-cheatsheet

Markdown Cheatsheet for Github Readme.md

maskedvolume

Outputs the total volume under a binary mask in a 3D image

mesh-polygon-to-mesh-vertex-data-transfer

Transferring and converting a VTK surface containing cell scalars to point scalars