Comments (1)
Hey @mabouelk , thanks for your interest in the pipeline.
Your problem is not directly related to the pipeline. Also, it is difficult to help without further information. On what kind of system do you try to install? On a local machine (laptop, workstation) or a cluster? Do you general have sudo
permissions on the system?
If possible, follow this manual to install Docker:
https://docs.docker.com/engine/install/ubuntu/#install-docker-ce
(For Linux)
from emg-viral-pipeline.
Related Issues (20)
- `annotate:ratio_evalue (1)` terminated with an error exit status (1) -- 'nextflow-autodownload-databases' Is a directory error HOT 1
- Can Prodigal-GV make 'real world' difference compared to original Prodigal? HOT 2
- Update ViPhOGs to remove old models that are associated with discontinued viral taxa HOT 5
- CWL discontinued
- No space left in /tmp HOT 2
- preprocess:rename idle state HOT 12
- Fix sankey plot visualization for undefined ranks
- Imitervirales assignment although not well supported by ViPhOGs
- Repository may be corrupted HOT 3
- Taxonomic ranks are inverted HOT 9
- Issue for running on ARM64-based Linux VM HOT 5
- wrapper_phage_contigs_sorter_iPlant HOT 1
- [Feature Request] Conda Distribution for Taxonomic Identification HOT 1
- Input file name collision on 'annotate:write_gff' HOT 2
- COBRA improves the completeness and contiguity of viral genomes assembled from metagenomes
- Missing process or function with name 'getFileSystem' HOT 3
- Not able to run "nextflow pull EBI-Metagenomics/emg-viral-pipeline" HOT 2
- Regression - VirSorter prophage report at the end of the contigs HOT 1
- CheckV failed HOT 4
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from emg-viral-pipeline.