eclarke Goto Github PK

amos-conda

Conda package for AMOS

argutils

Python utility for converting between config files and argument parsers

bintree

biochem-quizzer

A shitty little quiz program to help you memorize the abbreviations and polarity/charge of the amino acids.

biopython

Official git repository for Biopython (converted from CVS)

blog

blog

brocc

Consensus taxonomy assignment for short reads (great for fungi)

clark_scripts

Scripts for CLARK to facilitate deployment

condaintro

Introduction to using conda

config

Erik's Config Files

contigannotation

decontam

deepbinner

a signal-level demultiplexer for Oxford Nanopore reads

dna-utils

general utilities for manipulating sequences and fasta files - high performance kmer counting

dnabc

Identify DNA barcodes in high-throughput sequencing data files

dotfiles

the usual, just some dotfiles

dsk-conda

Conda recipe for DSK 1.6906

dsk-rs

A reimplementation of DSK (Rizk et al. 2013) in Rust

eclarke

Config files for my GitHub profile.

eclarke.github.io

eclectic

random R functions

eclpalettes

Qualitative color palette toolkit for R

eclthemes

Useful theme(s) for ggplot2

fastx

Speedy FASTA/FASTQ library and toolkit

forcats

🐈🐈🐈🐈: tools for working with categorical variables (factors)

fqfa-rs

Simple, quick FASTQ to FASTA converter

fqscan

Scans a directory of (optionally paired) FASTQ files for the prevalence of particular targets

ggbeeswarm

Column scatter / beeswarm-style plots in ggplot2

ggplot2

An implementation of the Grammar of Graphics in R

github_tutorial

A hands on forking, cloning, pulling, pushing, merging tutorial.