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Name: Evan K. Irving-Pease
Type: User
Company: University of Copenhagen
Bio: Assistant Professor in population genetics at the Globe Institute, University of Copenhagen.
Twitter: EvanIrvingPease
Location: Copenhagen
Name: Evan K. Irving-Pease
Type: User
Company: University of Copenhagen
Bio: Assistant Professor in population genetics at the Globe Institute, University of Copenhagen.
Twitter: EvanIrvingPease
Location: Copenhagen
Oxford Software Carpentry Workshop
AncestralPaths is a local ancestry painting technique based on genealogies produced by RELATE. The method aims to assign 'path' ancestries to segments of chromosomes the decribe the path back through a population history that segment has taken.
Source code from the paper: "Tracing the evolutionary path of the CCR5delta32 deletion via ancient and modern genomes" (2023) medRxiv
Source code from the paper: "The biocultural origins and dispersal of domestic chickens" (2022) PNAS
Coalescent Likelihood Under Effects of Selection - Inferring selection & allele frequency trajectories from nucleotide data
Source code from the paper: "The evolutionary history of dogs in the Americas" (2018) Science
Source code from the paper: "The Selection Landscape and Genetic Legacy of Ancient Eurasians" (2022) bioRxiv
Source code from the paper: "Elevated Genetic Risk for Multiple Sclerosis Originated in Steppe Pastoralist Populations." (2022) bioRxiv
Polygenic Adaptation Likelihood Method - Inferring natural selection on complex traits from whole-genome genealogies
SWC Workshop Git Lesson
Heuristic search algorithm for fitting qpGraph models
Source code from the paper: "Rabbits and the Specious Origins of Domestication" (2018) TREE
Pipeline to build a large human reference panel, using publicly available genomes
Source code from the paper: "Synchronous diversification of Sulawesi's iconic artiodactyls driven by recent geological events" (2018) Proc. R. Soc. B
Temporal selection exercises for PopGen21
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Data-Driven Documents codes.
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