elhumble Goto Github PK

agaz_85k_workflow_2018

🇦🇶 Workflow for processing data from the Agaz 90K SNP chip

elhumble.github.io

🐋🐋🐋 Jekyll source code for my personal website

ggpedigree

Draw nice pedigrees with ggplot2.

grains

⚖🍚 R package for calculating how much water you need for your grains

manta_pop_gen_2022

🧬🌊Code for our manuscript "Comparative population genomics of manta rays has global implications for mangement"

map2slim

GOslim annotation

mastoffel.github.io

minion_species_id

Species ID workflow with ONT amplicon data

mobulid_phylo

Workflow for generating mobulid phylogenetics figures 📉🐟

oryx_y_chr

Analysis of oryx Y chromosomes on UoE compute cluster

primerdesignr

R package for designing primers

rad_seals

scripts for rad analysis

rhina_popgen_2024

Scripts and data for population genomics analysis of bowmouth guitarfish

seal_demography_2018

📉💻 Workflow for reconstructing demographic history with SNPs

seal_rad_2018

🌊🇦🇶 RAD sequencing analysis workflow

shiny_snps

💫✏️Teaching resource for population genetics with SNPs

shiny_wildlifedetectr

🦏🐅🐘 Shiny app for running key wildlife forensic and population genetic analyses

sho_analysis_2020

R scripts for running downstream analysis of resequencing data

sho_reseq_2020

Read mapping and SNP calling run on UoE compute cluster

sho_reseq_2022

🖥️🧬 Code for our manuscript "Conservation management strategy impacts inbreeding and mutation load in scimitar-horned oryx"

sho_roh_load_2022

🖥️🧬 Code for our manuscript "Conservation management strategy impacts inbreeding and mutation load in scimitar-horned oryx"

snp_filtering

Transcriptomic SNP filtering workflow

sri_lanka_map

🌏🐠🇱🇰 Sri Lanka fish markets

thames_fish

wildlifedetectr

🐘🐅🦏 R package for running key wildlife forensic and population genetic analyses