eqtl-catalogue Goto Github PK
Name: eQTL Catalogue
Type: Organization
Bio: eQTL Catalogue development team
Location: Hinxton, UK and Tartu, Estonia
Blog: www.ebi.ac.uk/eqtl
Name: eQTL Catalogue
Type: Organization
Bio: eQTL Catalogue development team
Location: Hinxton, UK and Tartu, Estonia
Blog: www.ebi.ac.uk/eqtl
This repo contains a nextflow pipeline to do colocalisation analysis of QTLs against GWASs
Get up and running with EBI-themed Jekyll fast (rolled with gh-pages in mind, clone/fork suggested)
eQTL Catalogue Summary Statistics
Portable genotype imputation pipeline used by the eQTL Catalogue
Workflows for performing genotype QC before and after imputation
This pipeline will run QC measures of both genotype and phenotype data and will normalise quantified phenotypes
This repo contains necessary scripts to run Quality Control (QC) and Normalisation on phenotype count matrices generated by rnaseq pipeline.
Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue
RNA-seq quantification pipeline used by the eQTL Catalogue
Nextflow workflow for applying SuSiE finemapping model to a large number of molecular QTLs
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