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Erick Samera's Projects

abi-sauce icon abi-sauce

A repo for my introductory bioinformatics toolset.

generate-anki icon generate-anki

Given an input folder containing directories of chapters/units/subchapters which themselves contain notes (.txt), performs natural language processing to create cloze/fill-in-the-blanks notes for anki.

jl-simrad icon jl-simrad

A set of scripts in Julia for in-silico simulation of double-digest restriction-site associated DNA sequencing (ddRADseq).

jl-simrad-dev icon jl-simrad-dev

An implementation of simRAD in Julia for simulated prediction of loci expected in RADseq.

prokaryotic-ipcr icon prokaryotic-ipcr

Assess efficacy of primers for prokaryotic organisms for species-/strain-level identification, especially against 16S databases.

st-abi-sauce icon st-abi-sauce

A repository containing some requested bioinformatics tools, wrapped in Streamlit.

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