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Dale Erikson's Projects

adplugin icon adplugin

Autodock/Vina plugin for PyMol by Daniel Seeliger

awesome-resume icon awesome-resume

A collection of tips and links that will help you build the perfect resume!

compbio icon compbio

Scripts related to sequence processing and molecular modeling

csundergradcurr icon csundergradcurr

A list of resources I have put together for open-source learning representative of a full suite of undergraduate CS Courses

docs icon docs

Documentation for the Koes Research Group. Most likely woefully inadequate.

drugdiscovery icon drugdiscovery

A do it yourself guide to in silico drug discovery/design :)

flashcard icon flashcard

A simple python application to allow for flashcard deck creation and usage

glutaminasedrug icon glutaminasedrug

Applying developed lead optimization technique to a glutaminase inhibitor

ligan icon ligan

Deep generative models for drug discovery

machinelearning icon machinelearning

Generalized repo related to machine learning and data science tasks

md-scripts icon md-scripts

A collections of scripts for working molecular dynamics simulations

opendrugchem icon opendrugchem

Started 11-29-19: An Open Source Aggregation of Drug Information for ML and Meta Analysis

profilindrug icon profilindrug

Applying drug optimization through a decarboxylation pathway to a compound derived from a HTS with Profilin

reversesynthesis icon reversesynthesis

Personal project to solve organic synthesis problems (on back burner...)

rnaseqanalysis icon rnaseqanalysis

RNA-Seq Analysis for X. laevis; Observing maternal clearance and differential expression of genes

rosalind icon rosalind

My solutions to http://rosalind.info bioinformatics problems

scripts icon scripts

random, general scripts that I've used; hopefully it will help you in some way! :)

smallmolgenerator icon smallmolgenerator

Implementing a RNN to generate SMILES in accordance to small molecule drug-like principles

ultimatecompbio icon ultimatecompbio

A Comprehensive List of High Quality Resources to Learn Computer Science and Computational Biology (w/ Associated Topics)

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