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basic_starter

A plain C file to start

bgalp

Basic Genetic ALgorithm (and Parallel!)

bioconda-recipes

Conda recipes for the bioconda channel.

blitzg

bmsams

Bounded Multiple Sequence Alignment Made Simple

chromeister

A dotplot generator for large chromosomes

clunger

cudagecko

A cuda parallel implementation of the GECKO algorithm for exhaustive ungapped sequence comparisons

data

dnapermut

A simple method to generate DNA sequence permutations with partial order constraints

docker-geckomgv

A docker configuration to run GECKO-MGV anywhere!

easyparalleldispatcher

Ultra-simple bash parallel dispatcher for lists of execution commands

epwplots

Simple java plots

flhist

A simple C program to compute a histogram of lengths for extremely large fast files

freqnyser

An frequency analysis suite for DNA sequences

gecko

GECKO pairwise genome comparison workflow

geckomgv

Multigenome viewer in Django and JS - University of Málaga

gpunome

Accelerated version of CHROMEISTER with OpenCL

gpunome-cuda

iftheme-docs

You can find here docs and plug-ins used for iftheme

imsame

A Pairwise Incremental Multi-Staged Alignment Method for Metagenomes Comparison

isia_task

This is a task in the Master ISIA at the Universidad de Málaga.

jadecrossroads

A crossroads simulation using JADE

josee

kinectskeletongenerator

kmb-lcf

Kmer-based low complexity filter

lifeexplorer

Easy-to-use java interface to simulate a board with active life on it

paraliner

projectdba

Project for Database Administration course at University of Málaga (UMA), Spain

quickhits

Ultra fast method to compute the hits of a fixed k-mer size between a query and a target