Eviatar Bach's Projects
Modifications to CHASTE cell simulation code and utility scripts
an in-progress prototype interface for the land model
This is a 'hands-on' tutorial for the RIKEN International School on Data Assimilation (RISDA2018).
Ensemble Fokker–Planck filter
Code for "Ensemble Oscillation Correction (EnOC): Leveraging oscillatory modes to improve forecasts of chaotic systems"
Implements Optimization and approximate uncertainty quantification algorithms, Ensemble Kalman Inversion, and Ensemble Kalman Processes.
A beautiful, simple, clean, and responsive Jekyll theme for academics
Code for the paper "How sensitive are mountain glaciers to climate change?"
A Retina-ready Jekyll-powered blog with responsiveness, SEO, etc.; up at https://jaan.io
Everything within the Land model (Soil Plant Atmosphere Module, Land Hydrology, etc)
A hackable Lyapunov exponents calculator
Multi-model ensemble Kalman filter
Crash course on using Python and other modern tools to analyze your satellite datasets
Utility for facilitating parallel parameter sweeps
Python 3 code for polygonizing CompuCell3D lattices. This currently works for epithelial tissue: for cells in the tissue a polygon is created from the vertices defined by lattice sites which contact multiple cells. For boundary cells, the part of them that protrudes outwards from the tissue is approximated with a circular arc.
Code for the paper "Local atmosphere–ocean predictability: dynamical origins, lead times, and seasonality"
PyTyping is a Linux program for playing sounds when typing
Python program for digitization of barcoded records using an ADF scanner
Code for creating press release figures for the paper "Climate model shows large-scale wind and solar farms in the Sahara increase rain and vegetation"
:books: Simplified and community-driven man pages
In this tutorial, you will get a crash course on using Python to analyze your satellite datasets which can speed up the learning curve and improve research efficiency. We’ll cover the basics of the NetCDF and HDF self-describing data formats and demo basic analysis using Python and Jupyter Notebooks. This session will be beneficial for both experienced programmers who want overview of Python and also those just getting started with scientific programming..
Jekyll site