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evolgenomics's Projects

archive icon archive

Archival code from previous projects

cactus icon cactus

Official home of genome aligner based upon notion of Cactus graphs

faroeqtl icon faroeqtl

QTL mapping experiment between the Faroese mouse from Mykines island (MYK) and SM/J

haplotagging icon haplotagging

Code and binaries related to processing haplotagging data

longshanks icon longshanks

Data and analyses related to Castro et al., 2019, doi: 10.1101/378711

physlr icon physlr

:chains: Construct a Physical Map from Linked Reads

scaffhtag icon scaffhtag

Pipeline for scaffolding genome assemblies using haplotagging reads

shrinkwrapping icon shrinkwrapping

Amira Tcl and other utility scripts for segmenting objects and generating surfaces

supernova icon supernova

10x Genomics Linked-Read Diploid De Novo Assembler

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