fabiansinz Goto Github PK

atflow

TensorFlow library for Andreas Tolias lab

attorch

PyTorch Utilities

c2s

A toolbox for inferring spikes from calcium traces.

ca_source_extraction

Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

cadwell2020

Code for analyses reported in Cadwell et al., 2020

circstat-matlab

Matlab Circular Statistics Toolbox

commons

DataJoint schemas for neuroscience data

datajoint-addons

Addons for datajoint-python

datajoint-python

datascience_git_demo

docker-mdwiki

The source Dockerfile and instructions for CMC's MDWiki image on Docker Hub.

efish_locking

erc_template

ERC Proposal template (StG, CoG, AdG)

experanto

Python package to interpolate recordings and stimuli of neuroscience experiments

fabee

DataJoint schemata

fast-von-mises

Fast Von Mises fit

func-conn-notebook

ipython-notebook-tutorial

jiang2016

Slice cutting simulation for Jiang et al. 2016

jupyterhub-deploy-docker

Reference deployment of JupyterHub with docker

labloid

Lab Blog with IPython notebooks and git

locker

Efish locking analysis code

mediawikilogger

automatic logging tool for scientific numerical simulations that outputs mediawiki format

morphology

Morphology schemata

natter

A natural image statistics toolbox

neuralpredictors

Machine Learning Utils of Sinzlab

neuro_data

Neuro Datasets for System Identification

nnfabrik

A generalized model fitting pipeline that houses models, trainers, and datasets in datajoint and returns as well as stores trained models.

nvidia-docker-compose

Simple wrapper for docker-compose to use GPU enabled docker under nvidia-docker

pipeline

Schemata and libraries for neuroscientific data