Optimisation + Data Science
Repositories
fcampelo/Design-and-Analysis-of-Experiments
Lecture Notes on Design & Analysis of Experiments
fcampelo/EC-Bestiary
A bestiary of evolutionary, swarm and other metaphor-based algorithms
fcampelo/MScProjs2026_Team16
fcampelo/ExpDE
Modular DE algorithm for the experimental investigation of the effect of different recombination / mutation / selection operators.
fcampelo/DEMO
Differential Evolution for Multiobjective Optimization and its variants
fcampelo/EpiTune
fcampelo/CALANGO
CALANGO: Comparative AnaLysis with ANnotation terms for GenOmics
fcampelo/SCEMChecker
R package with consistency checking routines for Statistical Computing and Empirical Methods
fcampelo/epitopes2
Secret sauce for our epitope prediction and optimisation pipelines
fcampelo/uob-DataSci.github.io
fcampelo/orcslab.github.io
ORCS Lab website
fcampelo/MOEADr
R package MOEADr, a modular implementation of the Multiobjective Evolutionary Algorithm with Decomposition (MOEA/D) framework
fcampelo/epitopetransfer
fcampelo/CAISEr
CAISEr - Comparison of algorithms with Iterative Sample size Estimation in R
fcampelo/Loudspeaker-model
FEMM loudspeaker model
fcampelo/Imbalanced_epitope_prediction_2025
A pipeline that allows to test different imbalanced classification approaches systematically (initially developed by Summer intern Rodrigo Buzarco)
fcampelo/epitopetransfer-GPB
EpitopeTransfer code for paper in OUP Genomics, Proteomics and Bioinformatics
fcampelo/Pfeature
Computation of features of peptides and proteins
fcampelo/moses
Multi-Objective SEquence Splitter for data with group dependencies
fcampelo/MOPMOPP
Additional files for the paper "Multiobjective Evolutionary Algorithms for Operational Planning Problems in Open-Pit Mining"
fcampelo/colino
Recipes Steps for Supervised Filter-Based Feature Selection
fcampelo/upmsp-scheduling
Unrelated Parallel Machine Scheduling Problem with Sequence Dependent Setup Times
fcampelo/taxize
A taxonomic toolbelt for R
fcampelo/rdrop2
Dropbox Interface from R
fcampelo/epitope-prediction
fcampelo/ChocoLattes
Pacote R para processamento de informações a partir de conjuntos de CV Lattes
fcampelo/Otimizacao-Intro-Prog-Linear
Uma breve introdução a alguns conceitos de otimização e programação linear
fcampelo/esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins