Comments (2)
mixing centroid and profile stream
TODO(cp): if no centroid stream is available insert an NA
element.
R> xx <- readScans('/Users/cp//raw/180627_BSA_ACC_50fmol_R2.raw', scans = c(18821, 18832, 18821))
# No centroid stream available
# No centroid stream available
R> xx
[[1]]
$scan
[1] 18832
$rtinseconds
[1] 1023.35
$pepmass
[1] 417.2122 74677.0000
$title
[1] "File: 180627_BSA_ACC_50fmol_R2.raw; SpectrumID: ; scans: 18832"
$charge
[1] 3
$mZ
[1] 100.3362 102.0574 110.0744 115.1071 120.0649 120.0744 120.0853 124.3232 129.0950 129.1073 140.1505
[12] 147.1064 147.1177 194.2655 201.1105 201.1343 285.1153 285.1469 294.1954 417.1804 431.2106 488.2720
[23] 560.2335 560.3350 600.2833 698.5928 746.2614 746.4318 859.3582
$intensity
[1] 5443.471 6456.144 10592.354 7559.947 5255.708 38532.387 74677.000 7777.826 37941.840 72247.664
[11] 7553.341 8930.200 15827.687 8044.920 31152.357 44699.199 10253.352 9838.970 10893.082 11828.059
[21] 14430.847 10447.616 11627.857 15052.438 9356.620 12023.092 37841.012 45061.613 9663.162
attr(,"class")
[1] "list" "peaklist"
R>
from rawdiag.
commit c046a13
from rawdiag.
Related Issues (20)
- plot.peaklist function does not allow to overwrite title and y- n xlabels
- R 4.0.2 - Error: `x` must be a vector, not a `data.frame/rawDiag` object. HOT 3
- Problems reading Meta Data from QExactive HF / HFX Instruments HOT 28
- Reading Analag Traces from RawFiles HOT 7
- Read additional Infos from Raw Files (Status Log, Tune Method) etc. HOT 10
- create unit test for `read.raw.info()`
- Cannot find dependency "Spectra" HOT 2
- .computeBestPeptideSpectrumMatch function HOT 11
- Installation of new RawFileReader files HOT 19
- Error in source(tfo) : negative length vectors are not allowed HOT 15
- replace `warning` with `message`
- Deprecation messages for read.XIC() and readScans() HOT 1
- `funs()` was deprecated in dplyr 0.8.0.
- Error in FUN(left, right) : non-numeric argument to binary operator in `PlotCycleTime` HOT 2
- issues with tempfile opening
- I am trying to run read.raw, but it returns an error HOT 1
- [Extra feature that would be nice] Using m/z / RT values for QCs rather peptides
- protViz 0.6.8 required prior to install rawDiag on R.4.0.5
- Package "mardown" and "plyr" have to be installed so the ShinyApp works
- Problems with the read.raw()
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from rawdiag.