Name: Fabrice Jossinet
Type: User
Company: University of Strasbourg
Bio: Associate professor, former biologist & now creative bioinformatician. #kotlin #JavaFX #data #visualization #RNA #IoT
Twitter: rnartist_app
Location: Strasbourg, France
My name is Fabrice Jossinet. I'm biologist, bioinformatician & assistant professor at the University of Strasbourg, France.
I'm creating visual tools to explore and study 2D and 3D architectures of RNA molecules.
Languages used: Java, Kotlin, JavaFX, Python.
Some screenshots of my current highly active project RNArtist:
assemble2
Assemble2 allows you to design your RNA 2D structure interactively and to create and assemble the corresponding RNA 3D modules directly in UCSF Chimera
assemble2docker
A docker image containing the RNA algorithms needed by Assemble2
bacara
Bacara: an asynchronous Genome Browser
blendmyrna
caagle
a Comprehensive dAtAbase for Candida GLabrata
cola
htmlwidgets wrapping cola.js (http://marvl.infotech.monash.edu.au/webcola/)
cymol
A Community Molecular Viewer
dockerna
Docker images providing fully configured RNA algorithms
fjossinet
fjossinet.github.io
Personal webpage: http://fjossinet.github.io
hearthstone
A project to manage a collection of hearthstone cards
kaknas
A JavaFX app to visualize RNA alignments from Rfam database.
quantnet
A web tool to link Quantitative values to Networks (biological interactions, ontologies,...)
rfam-for-rnartist
Rfam families reformatted as projects to be usable with the graphical tool RNArtist
rna-js
Produce and Analyse RNA Data with Node.js
rna-science-toolbox
A platform to do RNA science
rnartist
With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...
rnartist-gallery-data
This project stores data about RNArtistCore scripts found with the bot RNArtist Gallery.
rnartistcore
A Kotlin DSL to create and plot RNA 2D structures. The drawing engine behind RNArtist to be used from the command line.
rnartistcore-binder
Launchable via MyBinder version of RNArtistCore, see https://github.com/fjossinet/RNArtistCore
rnartistfx
JavaFX widgets to visualize and manipulate RNA structures.
rnaseqdocker
A docker image providing RNA-seq algorithms
rpiboilerplate
A boilerplate project to easily get a JavaFX app running on a Raspberry Pi.
swiftrna
RNA concepts modelled with Swift
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
