fjrossello Goto Github PK
Type: User
fjrossello's Projects
alluvial
Alluvial diagrams
atac-seq
atac_dnase_pipelines
ATAC-seq and DNase-seq processing pipeline
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
bbmap
(Not Offical) BBMap short read aligner, and other bioinformatic tools.
chip-seq-analysis
deeplearning4j
Deep Learning for Java, Scala & Clojure on Hadoop & Spark With GPUs - From Skymind
fastq-multx
Demultiplexes a fastq.
gallery
Gallery of ggplot2 extensions
ggfortify
Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages.
orolab
ratnayake_et_al_2020_sc
Code describing the analysis of the single cell experiment included in Ratnayake et al 2020.
rstudio-addins
List of useful RStudio addins made by useRs
run-wgcna
Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)
runatac
R package for processing and plotting ATAC-seq data
wzhivhbv
Code used to analyse SC experiments included in Zhao et al
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