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zhengrongbin avatar zhengrongbin commented on September 13, 2024 1

Thank you! I am incorporating xlmhglite into MEBOCOST updates to replace xlmhg. I will keep you posted if I met anything. Appreciate your help.

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semenko avatar semenko commented on September 13, 2024

I'm working on patching this so mebocost can run -- looks like the pure python implementation is broken in Py3.8 as well, and you'll get the same error if you forcably use it, e.g. by adjusting the test runner at:
https://github.com/flo-compbio/xlmhg/blob/master/xlmhg/test.py#L14

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GuyTeichman avatar GuyTeichman commented on September 13, 2024

@zhengrongbin If you still require xlmhg, I have recently released a fork of this repository that supports Python>=3.8 and addresses some of the issues with the pure Python implementation of the algorithm.
https://github.com/GuyTeichman/xlmhglite
https://pypi.org/project/xlmhglite

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