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martindurant avatar martindurant commented on July 30, 2024

Do you mean that your original input datasets are already in zarr format? You could technically generate JSONs for each zarr input dataset and pass these to MultiZarrToZarr.

I don't think you could currently do multiple zarrs-in-zip, because ReferenceFileSystem requires a single file system to work on, and each zip counts as one.

A set of zarr datasets should really be the very simple case, since the directory structure is already of the right form, and we only ever need whole chunks. The implementation we have now is, if anything, too complicated for this case.

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lsterzinger avatar lsterzinger commented on July 30, 2024

Kerchunk also includes SingleHdfToZarr which creates the references https://fsspec.github.io/kerchunk/reference.html#kerchunk.hdf.SingleHdf5ToZarr

An example of this can be found in the docs here: https://fsspec.github.io/kerchunk/test_example.html#single-file-jsons

And in a blog post here (a bit out of date now but should still work, fsspec-reference-maker was renamed to kerchunk recently)

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lsterzinger avatar lsterzinger commented on July 30, 2024

My bad, I didn't read the original post close enough 😉

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