fuzzylife Goto Github PK

ayurveda

Supplementary code for the paper: Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19

ckg

Clinical Knowledge Graph (CKG) is a platform with twofold objective: 1) build a graph database with experimental data and data imported from diverse biomedical databases 2) automate knowledge discovery making use of all the information contained in the graph

diagnoser

diagnosis cluster

diamond

DIseAse MODule identification algorithm

docker-fastapi-ml

free_r_tips

Free R-Tips is a FREE Newsletter provided by Business Science. It comes with bite-sized code tutorials every week.

galah

More scalable dereplication for metagenome assembled genomes

graphormer

Graphormer is a deep learning package that allows researchers and developers to train custom models for molecule modeling tasks. It aims to accelerate the research and application in AI for molecule science, such as material design, drug discovery, etc.

humandiseaseontology

Repository for the Human Disease Ontology.

lavaa-react

lavaa-react

magnetique

Source code for the magnetique application

ms2pip_c

MS2PIP: MS2 Peak Intensity Prediction

ngff

Next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.

perseus-plugins

The perseus software for the statistical analysis of omics data (http://www.perseus-framework.org/) has a plugin architecture. Here you find the code necessary to develop your own plugins.

proteinmpnn

Code for the ProteinMPNN paper

proteomicsvisualization

This is a collection of minimal code to visualize various aspects of proteomics data.

r-mlops

reading-pca

scevan

R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the malignant cells. It also infers the copy number profile of malignant cells, identifies subclonal structures and analyses the specific and shared alterations of each subpopulation.

stitch

Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling

tcga_analysis_batch

torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models.

trends

Automatically exported from code.google.com/p/public-html-ani

vcfpp

vcfpp is a single C++ file for manipulating VCF/BCF format in a scripting way :)

vscode-selected-character-count

created to count number of sequences in fasta file

workshop-ml-proteomics

Workshop: Tackling peptide identification ambiguity with machine learning

yhydra

yHydra is a GPU-accelerated open search for MS-based proteomics data.