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Gabriele Nasello's Projects

bdcenter icon bdcenter

Dockerfiles of the Biomedical Data Center

boneingrowth_subroutine icon boneingrowth_subroutine

ABAQUS User Subroutine of the mechano-driven model of bone regeneration used in the paper " Mechano-driven regeneration predicts response variations in large animal model based on scaffold implantation site and individual mechano-sensitivity" (Bone 2021)

cellprotrusiontracker-frontiers2020 icon cellprotrusiontracker-frontiers2020

Image analysis software used for cell protrusion tracking in the paper "Primary human osteoblasts cultured in a 3D microenvironment create a unique representative model of their differentiation into osteocytes" (Frontiers in Bioengineering and Biotechnology 2020)

dockerbootstrap icon dockerbootstrap

Develop Flask Application using Docker and Bootstrap Templates. https://arshovon.com/blog/develop-flask-app-using-docker-and-bootstrap/

fem-env icon fem-env

Create a Docker Image with for processing data realted to Finite Element Methods (FEM)

fempy icon fempy

Module that converts Abaqus .inp files to readable python objects.

fiji-env icon fiji-env

Docker Image for image analysis in Fiji (with GUI)

flowcyto-env icon flowcyto-env

Create a Docker Image with a conda environment for flow cytometry data analysis

imagepy-env icon imagepy-env

Docker Image with a conda environment for image processing

napari-env icon napari-env

Docker Image for Napari combined with Jupyter Lab

odbhelper icon odbhelper

Module that reads Abaqus .odb files and automatically extracts the desired data in .csv or .vtk format.

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