gabrielnakamura's Projects
🌍 My contributions to the #30DayMapChallenge 2019
Simulations using gen3sis package to test species ancestor area reconstruction.
Personal website of Alison Presmanes Hill
:love_letter: Things I've learned about writing good READMEs.
A curated list of reproducible research case studies, projects, tutorials, and media
Workshop
bayesplot R package for plotting Bayesian models
Extension of BD function proposed by Legendre and De Cáceres (2013), to calculate functional and phylogenetic beta diversity and its components
Use target shooting and density diagram to better understand bias and variance
Data from the article "The relative role of equilibrium and non-equilibrium processes in shaping the species richness and functional diversity of terrestrial vertebrates in the Brazilian Atlantic Forest"
shiny app designed to visualize distribution patterns of phylogenetic tree branches
function to compute mean values and confidence intervals based on bootstrap procedure (adapted from Pillar, 1998)
Tools and metrics for evaluating diversity dynamics and ecological processes in deep time
Function to compute Camargo's evenness index
Repositório com materiais para o curso "Organização de dados biológicos e reprodutibilidade de projetos científicos" ministrado no PPG Ecologia UFRGS
My CV built using RMarkdown and the pagedown package.
CV
Data Analysis with Bootstrap Estimation in R
Data and R scripts for global analysis of Darwinian Shortfalls in fishes
Repository for data and scripts with analysis contained in manuscript "There and back again: an evolutionary tale on biological diversity"
Data and R scripts that allows to fully reproduce the analysis presented in the manuscript entitled "There and Back to the Present: An Evolutionary Tale on Biological Diversity"
R package for building customizable CVs from spreadsheets
Analysis of citation bias in ecological research
This repository contains R functions and data that can be used to reproduce Nakamura et al paper
Data and analysis for dimensionality of atlantic birds
Function to calculate the dimensionality of biodiversity based on evenness of eingenvalues obtained from a PCA, performed on a matrix M (communities described by metrics of biodiversity)
Package containing dimensionality and beta-diversity functions
Este repositório contém o material de apoio para a disciplina de reprodutibilidade computacional e ciência aberta ministrada pra o PPG Ecologia e Evolução da UFG em 2023