galopyz / hprc

Trying out hprc (high performance research computing)

hprc

Trying out hprc (High performance research computing) Miniai library from https://github.com/fastai/course22p2/tree/master.

Notebooks

• Copy of circadian21.ipynb

  • New loss function with +-24

• Another copy of circadian11.ipynb

  • Original bin_mse

• Another copy of circadian21.ipynb

  • MSE with -24

• circadian23:

  • Using hepatocyte datasets (https://pubmed.ncbi.nlm.nih.gov/32732282/)

• meta_analysis:

  • Using multiple datasets from "Meta-analysis of Diurnal Transcriptomics in Mouse Liver ... " (https://github.com/tgbrooks/circadian_comparison?tab=readme-ov-file)

• circadian24:

  • Using meta_analysis data

• circadian24-Copy1.ipynb:

  • Train using the original data.

• circadian24-Copy2.ipynb:

  • Copy1 with sigmoid 0~24.