Comments (2)
gamcil
commented on August 25, 2024
I think I found the issue - if you change the xmlns="http://www.w3.org/2000/node" to xmlns="http://www.w3.org/2000/svg" in your SVG, the file opens fine in Inkscape for me (can't test Illustrator, but should work?). I think this must have been a rogue find and replace bug from me... I've uploaded a new version of clinker (v0.0.14) which should fix this, so try updating and see if it works.
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kforcone
commented on August 25, 2024
Hi @gamcil, clinker v0.0.14 worked perfectly, I was able to open the html, save as an svg and open in Illustrator:) Thanks!!
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Related Issues (20)
- Errors in using gff and faa file
- The output result has no information HOT 4
- some issues for -mo --matrix_out parameter HOT 2
- Locus inversion showing incorrect locations
- Possible bug in cluster similarity output (-mo option)
- -gf/--gene_functions not working?
- Problem with -gf and -cm parameteres HOT 3
- try example encouter error
- Gene and species limit HOT 1
- Broken pipe error when using clinker to plot gene clusters HOT 2
- Renaming coding sequence back to gene number HOT 3
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- the legend HOT 4
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- Use clinker to visualize individual exons rather than whole gene?
- ValueError: not enough values to unpack (expected 2, got 1)
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