gaoyangluo Goto Github PK

adversarial-autoencoder

Chainer implementation of adversarial autoencoder (AAE)

argrankertutorial

An tutorial for arg_ranker and tell the users how to gain the desired result step by step.

bioinformatics-snakemake-pipelines

Collection of Snakemake pipeline for commin bioinformatics tasks

bioinformatics-tools

Here includes a lot of practical bioinformatics tools for members of GMC to use

clmb

Contrastive Learning for Metagenomic Binning

coatnet-pytorch

A PyTorch implementation of "CoAtNet: Marrying Convolution and Attention for All Data Sizes"

compranking

Metagenomic resistome risk ranking pipeline. It can comprehensively ranking the antimicrobial resistance risk of environmental metagenomic samples, also known as CompRanking.

deeplearning-500-questions

深度学习500问，以问答形式对常用的概率知识、线性代数、机器学习、深度学习、计算机视觉等热点问题进行阐述，以帮助自己及有需要的读者。 全书分为18个章节，50余万字。由于水平有限，书中不妥之处恳请广大读者批评指正。 未完待续............ 如有意合作，联系[email protected] 版权所有，违权必究 Tan 2018.06

deepmicrobefinder

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

ezbench

gaoyangluo.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

ictv-mmseqs2-protein-database

ictv-taxdump

NCBI-style taxdump files for International Committee on Taxonomy of Viruses (ICTV)

llm_text

This repo includes the code about my study on large language model LLM, including the transformer and its derivative model. It will last four months update in total.

machine-learning-collection

A resource for learning about Machine learning & Deep Learning

palm_annot

Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences

palmscan

plascad

Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.

ppr_practice

This script can help you comlete projection-pursuit regression.

python-data-analysis

pytorch-course-note

pytorch-tutorial

Build your neural network easy and fast, 莫烦Python中文教学

pytorch-tutorial-xiaotutui

PyTorch深度学习快速入门教程（绝对通俗易懂！）

pytorch_quicktutorial

Introductory to pytorch, including configeration, classical model (CNN, LSTM, BERT, Transformer) and demo practise.

pytorch_tutorial

《Pytorch模型训练实用教程》中配套代码

rdrp-scan

Exploring the "dusk matter" of the RNA virosphere

reinforcement_learning_tutorial

This repo includes the code about my study on reinforcement. It will last four months update in total.

seekr

A library for counting small kmer frequencies in nucleotide sequences.

skills

个人的技能树仓库，主要包含个人机器学习以及深度学习的笔记