gatb Goto Github PK
Name: GATB
Type: Organization
Bio: Genome Analysis Toolbox with de-Bruijn graph
Location: France
Blog: http://gatb.inria.fr
Name: GATB
Type: Organization
Bio: Genome Analysis Toolbox with de-Bruijn graph
Location: France
Blog: http://gatb.inria.fr
compacted de Bruijn graph construction in low memory
Bloocoo is a k-mer spectrum-based read error corrector, designed to correct large datasets with a very low memory footprint.
DiscoSnp is designed for discovering all kinds of SNPs (not only isolated ones), as well as insertions and deletions, from raw set(s) of reads.
k-mer counting software
Core library of the Genome Analysis Toolbox with de-Bruijn graph
This project hosts the source code of the GATB-Core Programming Online Tutorial.
GATB Minia assembly pipeline
Build a single Docker image containing all GATB-Tools ready to be used. This is an official repository, not a mirror.
A script to facilitate the use of Github Release API v3
Leon - FASTA and FASTQ read compressor
MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.
Minia is a short-read assembler based on a de Bruijn graph
Python3 wrapper for GATB-Core.
Short Read Connector (SRC)
Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.
TakeABreak detects inversion breakpoints in read datasets without a reference genome
Manipulation of unitigs and contigs
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.