Comments (5)
https://www.pombase.org/browse-curation/fission-yeast-bp-go-slim-terms ?
from go-ontology.
Thanks Val, that was a very useful point to start.
from go-ontology.
eukaryote cellular process subset - BP
<style> </style>GO:0006091 | generation of precursor metabolites and energy |
---|---|
GO:0006260 | DNA replication |
GO:0006281 | DNA repair |
GO:0006310 | DNA recombination |
GO:0006351 | DNA-templated transcription |
GO:0006412 | translation |
GO:0006457 | protein folding |
GO:0006629 | lipid metabolic process |
GO:0006914 | autophagy |
GO:0007155 | cell adhesion |
GO:0008152 | metabolic process |
GO:0010468 | regulation of gene expression |
GO:0012501 | programmed cell death |
GO:0016070 | RNA metabolic process |
GO:0016192 | vesicle-mediated transport |
GO:0019725 | cellular homeostasis |
GO:0019748 | secondary metabolic process |
GO:0022402 | cell cycle process |
GO:0022607 | cellular component assembly |
GO:0023052 | signaling |
GO:0044238 | primary metabolic process |
GO:0048870 | cell motility |
GO:0055085 | transmembrane transport |
GO:0071554 | cell wall organization or biogenesis |
GO:0098754 | detoxification |
from go-ontology.
eukaryote cellular process subset - CC
<style> </style>GO:0005576 | extracellular region |
---|---|
GO:0005618 | cell wall |
GO:0005634 | nucleus |
GO:0005739 | mitochondrion |
GO:0005768 | endosome |
GO:0005773 | vacuole |
GO:0005777 | peroxisome |
GO:0005783 | endoplasmic reticulum |
GO:0005794 | Golgi apparatus |
GO:0005815 | microtubule organizing center |
GO:0005829 | cytosol |
GO:0005840 | ribosome |
GO:0005856 | cytoskeleton |
GO:0005886 | plasma membrane |
GO:0031012 | extracellular matrix |
GO:0032991 | protein-containing complex |
GO:0042995 | cell projection |
GO:0045202 | synapse |
from go-ontology.
eukaryote cellular process subset - MF
<style> </style>GO:0003677 | DNA binding |
---|---|
GO:0003723 | RNA binding |
GO:0003774 | cytoskeletal motor activity |
GO:0003824 | catalytic activity |
GO:0005198 | structural molecule activity |
GO:0005215 | transporter activity |
GO:0005515 | protein binding |
GO:0008289 | lipid binding |
GO:0016209 | antioxidant activity |
GO:0036094 | small molecule binding |
GO:0045182 | translation regulator activity |
GO:0060090 | molecular adaptor activity |
GO:0098772 | molecular function regulator activity |
GO:0140104 | molecular carrier activity |
GO:0140110 | transcription regulator activity |
GO:0140223 | general transcription initiation factor activity |
GO:0140299 | small molecule sensor activity |
GO:0140313 | molecular sequestering activity |
from go-ontology.
Related Issues (20)
- Obsoletion request: GO:0070528 protein kinase C signaling & regulation children
- add check preventing partial EC xrefs on leaf terms
- regulation of protein dephosphorylation (obsoletion candidate) HOT 4
- Rhea alignment of glucosidase II HOT 4
- Fix remaining cases of terms with duplicated MetaCyc xref HOT 3
- GO:000903, Rhea reaction has been updated
- Term definitions and scope of GO:0052695 cellular glucuronidation and GO:0019390 glucuronoside biosynthetic process HOT 9
- Fix remaining terms with >1 (apparent) EC xref
- Taxon constraint: GO:0009089 | lysine biosynthetic process via diaminopimelate
- Catalytic activity terms with no cross references - terms in scope for GO
- Add check for database definition cross references to also be a general cross reference HOT 2
- Catalytic activity (MF) terms with multiple MetaCyc mappings HOT 9
- Pathway (BP) terms with multiple MetaCyc mappings HOT 17
- carbonyl reductase (NADPH) activity (GO:0004090)
- alcohol dehydrogenase/aldo-keto reductase hierarchy HOT 8
- typo in term nameGO:0103045 | methione N-acyltransferase activity
- Obsoletion request: GO:0035629 N-terminal protein amino acid N-linked glycosylation; HOT 20
- Obsoletion request: GO:0071170 | site-specific DNA replication termination GO:0071946 | cis-acting DNA replication termination HOT 2
- Missing parent: polyphosphate import into vacuole HOT 1
- Obsoletion request: GO:0030242 autophagy of peroxisome HOT 3
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from go-ontology.