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ValWood avatar ValWood commented on September 26, 2024

https://www.pombase.org/browse-curation/fission-yeast-bp-go-slim-terms ?

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pgaudet avatar pgaudet commented on September 26, 2024

Thanks Val, that was a very useful point to start.

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pgaudet avatar pgaudet commented on September 26, 2024

eukaryote cellular process subset - BP

<style> </style>
GO:0006091 generation of precursor metabolites and energy
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0006351 DNA-templated transcription
GO:0006412 translation
GO:0006457 protein folding
GO:0006629 lipid metabolic process
GO:0006914 autophagy
GO:0007155 cell adhesion
GO:0008152 metabolic process
GO:0010468 regulation of gene expression
GO:0012501 programmed cell death
GO:0016070 RNA metabolic process
GO:0016192 vesicle-mediated transport
GO:0019725 cellular homeostasis
GO:0019748 secondary metabolic process
GO:0022402 cell cycle process
GO:0022607 cellular component assembly
GO:0023052 signaling
GO:0044238 primary metabolic process
GO:0048870 cell motility
GO:0055085 transmembrane transport
GO:0071554 cell wall organization or biogenesis
GO:0098754 detoxification

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pgaudet avatar pgaudet commented on September 26, 2024

eukaryote cellular process subset - CC

<style> </style>
GO:0005576 extracellular region
GO:0005618 cell wall
GO:0005634 nucleus
GO:0005739 mitochondrion
GO:0005768 endosome
GO:0005773 vacuole
GO:0005777 peroxisome
GO:0005783 endoplasmic reticulum
GO:0005794 Golgi apparatus
GO:0005815 microtubule organizing center
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005856 cytoskeleton
GO:0005886 plasma membrane
GO:0031012 extracellular matrix
GO:0032991 protein-containing complex
GO:0042995 cell projection
GO:0045202 synapse

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pgaudet avatar pgaudet commented on September 26, 2024

eukaryote cellular process subset - MF

<style> </style>
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0003774 cytoskeletal motor activity
GO:0003824 catalytic activity
GO:0005198 structural molecule activity
GO:0005215 transporter activity
GO:0005515 protein binding
GO:0008289 lipid binding
GO:0016209 antioxidant activity
GO:0036094 small molecule binding
GO:0045182 translation regulator activity
GO:0060090 molecular adaptor activity
GO:0098772 molecular function regulator activity
GO:0140104 molecular carrier activity
GO:0140110 transcription regulator activity
GO:0140223 general transcription initiation factor activity
GO:0140299 small molecule sensor activity
GO:0140313 molecular sequestering activity

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