3d-tsne

A Unity project for visualizing t-SNE data in 3D.

5years

ailearning

AiLearning: 机器学习 - MachineLearning - ML、深度学习 - DeepLearning - DL、自然语言处理 NLP

astrocyte-single-cell

Single cell analysis for astrocyte data

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bioinformatics123

bioinformatics_links

biotrainee

chip-seq-analysis

ChIP-seq analysis notes from Tommy Tang

cortical_astrocyte_mapping

Mapping locations of cortical single astrocyte RNA-seq

csvkit

A suite of utilities for converting to and working with CSV, the king of tabular file formats.

drawio

Source to www.draw.io

excelerate-scrnaseq

Single RNA-seq data analysis with R (Finland, May, 2019)

fluentterminal

A Terminal Emulator based on UWP and web technologies.

general0710

geo

geomirror

github-pages-example

BeiYuu's Blog

gtex-pipeline

GTEx & TOPMed data production and analysis pipelines

mfs_peripheralcentralnervesystem

Scripts of Ydens et al. Nature Neuroscience. 2020

mind

Using Multiple Measurements of Tissue to Estimate Subject- And Cell-Type-Specific Gene Expression via Deconvolution

monocle3

my-r

a small collection for my R scripts

myscrna-seq

ngs-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

normal_human_astrocyte_3d

Code for paper https://peerj.com/articles/2829/

picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

rna-seq-example

An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)

rnaseq-workflow

A repository for setting up a RNAseq workflow

rnaseq_tutorial

Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.