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Few queries about yleaf HOT 2 CLOSED

genid avatar genid commented on July 25, 2024
Few queries

from yleaf.

Comments (2)

6bass6-010 avatar 6bass6-010 commented on July 25, 2024

Hi,

Apologies for the late response.

  1. That function has not been implemented yet; however, I do see how it could be a useful feature. I will try to have it implemented in the next version.
  2. Certainly, if you collect you bam files in a single directory and specify that directory as the input it will automatically analyze all bam files present there.

Best wishes,
Arwin

from yleaf.

6bass6 avatar 6bass6 commented on July 25, 2024

Hi. Thanks for the nice software. I have 2 queries.

  1. Is there a way to ignore C->T and G->A SNPs in the tool's prediction? That will be invaluable for ancient DNA.
  2. Is there a way to run this on multiple bam files in one command?

Thank you.

The funcionality for aDNA is now implemented in v3.2.1 that was just released

from yleaf.

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