genomicsaotearoa Goto Github PK
Name: Genomics Aotearoa
Type: Organization
Bio: See our GitHub pages (link below) for more information on our public repositories.
Location: New Zealand
Name: Genomics Aotearoa
Type: Organization
Bio: See our GitHub pages (link below) for more information on our public repositories.
Location: New Zealand
advanced-shell-for-bioinformatics
Docker containers used by cancer-seq-pipeline.
Population genomic analysis of the brown marmorated stink bug, Halyomorpha halys for the GA Invasomics project
Bpipe-based pipeline for processing cancer genomics data in fastq format through to annotated variants in a simple report.
Workflows relating to the GA clinical genomics project
A guide to getting started in the cloud
Repo supporting the manuscript 'Journeying towards best practice data management in biodiversity genomics'.
Docker container to download dbNSFP 'database' and wrangle it into a format suitable for pipeline annotation process
Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.
A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.
EWAS Data Analysis
De novo assembler for single molecule sequencing reads using repeat graphs
Pages for good practice discussion, examples and more
Analysis of genomic markers in invasive and non-invasive species genomes for the GA Invasomics project.
Code and files for Genomics Aotearoa github.io website
Microbial genomics pipeline to build and analyse genome graphs
This repository aims to hosting workflows/codes that have been developed for GA high-quality-genome projects.
Training materials for the 2023 HTS Plant Health and Environment Laboratory workshop
A Snakemake workflow to process single samples or cohorts of paired-end sequencing data (WGS or WES) using trim galore/bwa/GATK4/parabricks.
Intro to R coding block for Indigidata Aotearoa
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.