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Gibs's Projects

q2-convexhull icon q2-convexhull

QIIME2 plugin for calculating the convex hull as a diversity metric

qadabra icon qadabra

Snakemake workflow for comparison of differential abundance ranks

qupid icon qupid

Case-control matching for microbiome data

qurro icon qurro

Visualize differentially ranked features (taxa, metabolites, ...) in tandem with log-ratios of their sample abundances

snakemake icon snakemake

This is the development home of the workflow management system Snakemake. For general information, see

songbird icon songbird

Vanilla regression methods for microbiome differential abundance analysis

vim-delim icon vim-delim

VIM plugin to make viewing delimited text files (TSV, CSV, etc.) easier

xebec icon xebec

Snakemake pipeline for microbiome diversity effect size benchmarking

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