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melanoma_brain_metastasis

metaicb

mgc-biosb-singlecellanalysis2020

microbiomestatplot

Interpretation and visualization of microbiome charts

milopy

Python implementation of Milo for differential abundance testing on KNN graph

milor

R package implementation of Milo for testing for differential abundance in KNN graphs

mouse_cross-condition_pancreatic_islet_atlas

mp_duty

抓取网络文章到github issues保存

multiomics-integration

Potato ‘omics data analysis pipelines

nat-bio_2019_single-cell-multiomic-analysis-identifies-regulatory-programs-in-acute-leukemia

Project bulk/single-cell RNA-seq data to given LSI space

nat-immu_bcells_2023rahul

nature-cancer.gbm-.makina

Master Kinase Activity

nature_2017_scrnaseq-malaria

Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria parasites".

nature_2021_breast-tumors-maintain-a-reservoir-of-subclonal-diversity-during-expansion

Scripts used for the ACT paper

nature_2022_ovarian-cancer-mutational-processes-drive-site-specific-immune-evasion

Supporting material for publication: "Ovarian cancer mutational processes drive site-specific immune evasion"

nature_harmony-_tumor_vs_inflamed

Scripts used for data analysis in our tumor vs inflamed human tissues paper

nature_human-distal-airways-contain-a-multipotent-secretory-cell-that-can-regenerate-alveoli

netbid-in-covid-19-plasma-proteomics-

ngs_summer_course_aarhus

Repository for the NGS summer course at Aarhus university

nmf-_sc-ebola

Analysis scripts used in the analysis of Seq-Well and CyTOF datasets of Ebola virus infected PBMCs

nmf_brown_hydra_genomes

noack_et_al_natneuro2021

Publication Page for the Noack et al. 2021 Nature Neuroscience paper

omicverse

A python library for multi omics included bulk and single cell RNA-seq analysis.

onco-fetal-caf-in-hcc

openproblems

Formalizing and benchmarking open problems in single-cell genomics

palantir_germanosprostatescrnaseq

pan-nk

These are scripts for pan-cacner NK cells analyses.

pancaf_corr_heatmap

pancancer

Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0

panmyeloid