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Name: Griffin Calme
Type: User
Location: Wayne State University
Name: Griffin Calme
Type: User
Location: Wayne State University
Generates all possible sequences of amino acids and saves to a FASTA file. You can edit the min and max length to tell the program what length of sequences is desired.
Sequence assembler for amino acid subsequences. Takes a line-separated text file and returns the assembled/merged peptides (using Needleman-Wunsch global alignment) as a text file.
Source code used in Yue Qi's dissertation
Fork of squirrel eat squirrel from "Making Games with Python & Pygame"
Some things I've written to solve little problems or out of curiosity
Parses out the "Protein names" and "Gene names" from "Fasta headers" and fills in the blank cells
Calculate Vmax and Km from substrate concentration and reaction velocity
Various scripts I've written for munging MaxQuant output data
Color deconvolution and stain segmentation for immunohistochemical (IHC) tumor sections
A couple of scripts intended to search against phosphosite plus and dbPAF to check if identified phosphosites have already been catalogued
Generates a database of orthologous protein phosphosites from pairwise orthologous genes of the 6 species contained in dbPAF & Humans.
Fork of Raspbian Python Games -- with a few mods
Takes a directory of subfolders and renames the files in the subfolders as 'subfolder_filename' then moves the files up & out of the subfolder before deleting the subfolder
Web app for temperature and humidity monitoring with raspberry pi, now with a better graph!!! Forked from: https://github.com/hawkerpl/damn_hot_pie
Convert UniProt fasta to excel
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