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Name: German Tischler
Type: User
Company: Miltenyi Biotec
Location: Teterow, Germany
German Tischler's Projects
alignalt
Program aligning contigs to reference regions for detecting matching stretches
alternatives
Detection of alternatives by local assembly of short reads
bambamc
lightweight C implementation of name collating BAM file input and BAM file output
bambamc-debian
Debian packaging files for bambamc
bamseqchksumjava
Prototype implementation of BAM checksumming in Java
biobambam
Tools for bam file processing
biobambam2
Tools for early stage alignment file processing
bwa
Burrow-Wheeler Aligner for pairwise alignment between DNA sequences
bwtb3m
Burrows Wheeler Transform By Balanced Block Merging
canu
A single molecule sequence assembler for genomes large and small.
compile_damapper
Compilation and wrapper scripts for running damapper
daccord
d'accord is a non hybrid long read consensus program based on local de Bruijn graph assembly
daligner
Find all significant local alignments between reads
damapper
long read to reference mapping tool
damapper_bwt
damapper plus BWT based seed searching
dascrubber
Alignment-based Scrubbing pipeline
dazz_db
The Dazzler Data Base
fast5tofastq
fast5 to fastq conversion tool
fit
FIT
hpcsched
HPC job dependency scheduler
io_lib
Staden Package "io_lib" (sometimes referred to as libstaden-read by distributions). This contains code for reading and writing a variety of Bioinformatics / DNA Sequence formats.
lastools
Tools for processing DALIGNER .las files
libmaus
libmaus
libmaus-debian
debian packaging files for libmaus
libmaus2
collection of data structures and algorithms
liftingwavelettransform
implementations of lifting scheme based wavelet transforms in C++
loresim
Long read simulation
loresim2
lustreparallelread
Library for parallel reading from Lustre file systems
multiqc
Aggregate results from bioinformatics analyses across many samples into a single report.
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