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Guy M. Harris's Projects

gcsscore icon gcsscore

Source code and description of GCSscore Package

gcsscore-probefile-functions icon gcsscore-probefile-functions

Contains the necessary functions to generate probe-level annotation packages from Bioconductor platform design (pd) packages.

hta20.probefile icon hta20.probefile

AnnotationForge generated package containing probe-level information for the HTA-2_0 (Human Transcriptome Array 2.0) microarray. Used by the GCSscore R package for differential gene expression analysis.

mta10.probefile icon mta10.probefile

Contains annotated probe-level information for the MTA-1_0 (ClariomD mouse) microarray. Used by the GCSscore R package for differential gene expression analysis.

mta10probe icon mta10probe

AnnotationForge generated package containing the probe sequence information for MTA-1_0 (ClariomD mouse) array. The package contains all the data within the Affymetrix/Thermo-Fisher "probe_tab" file.

ss2.mta.gene.data icon ss2.mta.gene.data

Contains the data files for analyzing MTA / ClariomD (mouse) arrays at the gene-level (transcription cluster ID) with Sscore2 R package

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