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accseg

app-mrtrix3-act

Runs mrtrix3 ACT (Anatomically Constrained Tractography) using either single- or multi-shell diffusion-weighted MRI data.

app-track_alic

Containerized app for tracking the anterior limb of the internal capsule (in humans)

bidshandler

Library for loading and manipulating BIDS compatible MEG data

containers

Repo for recipes to put on singularity hub

dcmstack-feedstock

A conda-smithy repository for dcmstack.

eyecam

Python script to record eye camera video while displaying feed to researcher during fMRI experiment

hcppipelines

heudiconv

A flexible DICOM converter for organizing brain imaging data into structured directory layouts

img-tools

Experimental tools for image processing (demosaicing, denoising, superresolution, etc.)

ismrmrd-python-tools

ISMRMRD Python Toolbox

linkages

mechanical linkage simulator

mrtrix3

MRtrix3 provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density

nibabel

Python package to access a cacophony of neuro-imaging file formats

nitest-dicom

DICOM test files for testing nibabel

scikit-learn

scikit-learn: machine learning in Python

singularity

singularity-recipe-share

torchsample

High-Level Training, Data Augmentation, and Utilities for Pytorch

unet

unet for image segmentation

vampyre

Approximate Message Passing in Python

wma_pytools

refactoring of wma_tools into python