hgbryan / z-squad

repo for project zoophy

z-squad

repo for project zoophy

ZooPhy README

Overview ZooPhy is web application aimed at providing helpful and insightful analysis on virus trajectories to researchers and public health agencies. Using ZooPhy, users from around the world can access the repository of virus samples held in ZooPhy’s databases to find histories and construct phylogenetic trees and construct a visual trajectory of the virus’ pathways in populations. Users will be able to select specific criteria from virus type to host species and can drill down even further for advanced users. ZooPhy will start their query, which may take up to a few days, and then send them a notification when the process has been completed. This will produce a phylogenetic tree of the virus and also a KML file to place against Google Earth so the trajectory of the virus through populations can be viewed geographically by the user.

List of Contributors • Dr. Matthew Scotch • Mehrad Noghrehchi • Andrew Paxia • Bryan Mercado • Jeff Recker • Hunter Bryan

Release Notes v 0.1:

README file created.

Visual mockup created. https://drive.google.com/a/asu.edu/file/d/0B6XMxKdhKp0xN1pwbnRGcUY5eVk/view?usp=sharing

Waffle.io started.

v 0.2 Current PHP/MySQL framework uploaded to Github.

Install Instruction:

1. Install WAMP server on local machine 2.Type localhost into browser to access phpmyadmin
2. Create DB with name "Users", and table "accounts" table to store user account information
3. Drop Zoophy folder into c/wamp/www directory in computer
4. Once table created, the connect folder connects the front end to DB on local machine
5. Open localhost, select Zoophy and home page loads
6. Click "login" and login page accepts account info and logs user in