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Hello! 🌊🚢

I am a oceanography graduate student in the MIT and WHOI Joint Program. I am currently a PhD candidate in the WHOI Van Mooy Lab studying global factors effecting the biogeochemical cycling of lipids. I have worked previously in the Apprill Lab studying mircobes and fat in whale digestion. Here you can find my work on open source software tools that aim to improve enviromental mass spectrometry. I am currently the maintainer of the LOBSTAHS package and am developing more screening tools as part of that workflow.

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Henry Holm's Projects

autobod icon autobod

Package for Interpretation and Analysis of AutoBOD (Auto Biological Oxygen Demand) Files

camera icon camera

This is the git repository matching the Bioconductor package CAMERA: Collection of annotation related methods for mass spectrometry data

hpc_shellscripts icon hpc_shellscripts

A collection of various shell scripts for transcriptomic data analysis.

lipidomicstoolbox icon lipidomicstoolbox

Scripts for converting & processing HPLC-MS lipid data from an Exactive Orbitrap mass spectrometer

lob_tools icon lob_tools

In Development Screening tools for LOBSTAHs that will hopefully be part of that package soon.

lobstahs-1 icon lobstahs-1

Git repository for the R package "LOBSTAHS" (Lipid and Oxylipin Biomarker Screening Through Adduct Hierarchy Sequences)

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