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18genomes

2017-ucsc-metagenomics

Workshop materials for shotgun metagenomics

admixture_graph

Module for analysing admixture graphs

admixturepipeline

A pipeline that accepts a VCF file to run through Admixture

agat

Another Gff Analysis Toolkit

ann-utils

utils for annotation

annie

👾 Fast, simple and clean video downloader

arxiv-sanity-preserver

Web interface for browsing, search and filtering recent arxiv submissions

asprofile

astral

Accurate Species TRee ALgorithm

awesome-alternative-splicing

Alternative splicing resource

bbmap

(Not Offical) BBMap short read aligner, and other bioinformatic tools.

beast-mcmc

Bayesian Evolutionary Analysis Sampling Trees

beastshell

BeanShell scripting for BEAST2

bedtools2

bedtools - the swiss army knife for genome arithmetic

bgi-full-length-rna-analysis-pipeline

Full-Length RNA Analysis pipeline developted by BGI RD group.

biocode

Bioinformatics code libraries and scripts

biodata

All of my various bioinformatic scripts fit for public consumption (loosely defining "fit")

bioinformatics123

bioinformatics_train

虽然喜欢做湿实验，但是开始了生信的学习之路

blast2ogmsa

Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis

burntrees

Perl scripts for manipulating output from phylogenetic MCMC software (MrBayes, BEAST, PhyloBayes, etc)

cban

releases of beast2 packaged zip files in a reliable location

cdna_cupcake

Miscellaneous collection of Python and R scripts for processing Iso-Seq data

cflib

A library to create and handle counts files used with PoMo.

cgmaptools

toolbox for analysing BS-seq data, advance features in SNV, ASM and DMR

clinker

Gene cluster comparison figure generator

cnci

Coding-Non-Coding Index (CNCI)

comparem

A toolbox for comparative genomics.

cpc2

Verbatim Copy of CPC 2.0