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7t_deep_medullary_veins

Source code for "Quantification of deep medullary veins at 7 T brain MRI" at https://doi.org/10.1007%2Fs00330-016-4220-y

7t_pvs

Source code of "Automatic quantification of perivascular spaces in T2-weighted images at 7 T MRI", DOI: https://doi.org/10.1016/j.cccb.2022.100142

8dm40-machine-learning

TU/e 8DM40 Machine Learning in Medical Imaging and Biology course materials.

adamchallenge

The Aneurysm Detection And segMenation Challenge: http://adam.isi.uu.nl/

alglib

ALGLIB is a cross-platform numerical analysis and data processing library.

big-list-of-naughty-strings

The Big List of Naughty Strings is a list of strings which have a high probability of causing issues when used as user-input data.

boutiques

JSON schema and tools for boutiques application descriptors.

brainbrowser

Web-based visualization tools for neurological data.

cbrain

CBRAIN is a flexible Ruby on Rails framework for accessing and processing of large data on high-performance computing infrastructures.

cmis-and-cortical-thickness

communitymodules

MeVisLab community modules (previously known as "mevislabmodules" on SF.net)

desk

desk exposing server kit : HTML5 solution for remote processing and visualization

dlib

A toolkit for making real world machine learning and data analysis applications in C++

dlwpt-code

Code for the book Deep Learning with PyTorch by Eli Stevens, Luca Antiga, and Thomas Viehmann.

docker-airflow

Simple Airbnb Airflow container

docker-images

Repository of Docker images created by Continuum Analytics

dwv

DICOM Web Viewer.

elastix-docker

Dockerfile for elastix (toolbox for rigid and nonrigid registration of images)

firefly-iii

Firefly: a personal finances manager

girder

A data management platform for the web

girder_worker

Distributed task execution engine with Girder integration

gradcam_plus_plus-pytorch

A Simple pytorch implementation of GradCAM and GradCAM++

intror

lesymap

Lesion to Symptom Mapping in R

loris

LORIS is a web-accessible database solution for longitudinal multi-site studies.

matlab-compiler-runtime-docker

A Docker file for the Matlab Compiler Runtime

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

mevislab-hausdorff-distance

MeVisLab module for computing the Hausdorff distance.

midsagittalapp

MidsagittalApp: to compute the midsagittal plane and surface on brain images

mixlacune

Submission for the VALDO challenge Task3 - lacune segmentation