python wrapper h5bench won't run about h5bench

[christophermaynard]

Unfortunately the build no longer works. I cloned the head of the repository but when I try and build I get ...

cmake ..
-- The C compiler identification is Clang 11.0.0
-- The CXX compiler identification is Clang 11.0.0
-- Cray Programming Environment 2.7.6 C
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/cray/pe/craype/2.7.6/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Cray Programming Environment 2.7.6 CXX
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/cray/pe/craype/2.7.6/bin/CC - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found MPI_C: /opt/cray/pe/craype/2.7.6/bin/cc (found version "3.1") 
-- Found MPI_CXX: /opt/cray/pe/craype/2.7.6/bin/CC (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
CMake Warning (dev) at CMakeLists.txt:13 (find_package):
  Policy CMP0074 is not set: find_package uses <PackageName>_ROOT variables.
  Run "cmake --help-policy CMP0074" for policy details.  Use the cmake_policy
  command to set the policy and suppress this warning.

  Environment variable HDF5_ROOT is set to:

    /opt/cray/pe/hdf5-parallel/1.12.0.3/crayclang/9.1

  For compatibility, CMake is ignoring the variable.
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found HDF5: Included by compiler wrappers   
-- Using HDF5 version: 
CMake Error at CMakeLists.txt:114 (add_subdirectory):
  The source directory

    /work/n02/n02/cmaynard/H5bench/h5bench/amrex

  does not contain a CMakeLists.txt file.


CMake Error at CMakeLists.txt:144 (add_subdirectory):
  The source directory

    /work/n02/n02/cmaynard/H5bench/h5bench/openpmd

  does not contain a CMakeLists.txt file.


-- Configuring incomplete, errors occurred!

[jeanbez]

@christophermaynard We have made some changes to detect that and avoid users from explicitly calling srun/mpirun in the last released version. Could you confirm it is working?

[jeanbez]

@christophermaynard It seems that you did not clone the submodules. Could you try git submodule update --init and ensure you are doing a clean build (remove the CMakeCache.txt if you have it). Please, let me know if that solves your issue.

[jeanbez]

@christophermaynard Are you still having issues after a clean build or was your problem solved? If everything was solved, please let us know, otherwise, we will be closing the issue on March 10.

[jeanbez]

We believe this issue has been resolved and since we have not heard back, we are closing it.