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hushunbo's Projects

3d_denseseg icon 3d_denseseg

The implementation of 3D_DenseSeg for infant brain MRI segmentation

abide icon abide

ABIDE Preprocessed Initiative

accseg-net icon accseg-net

Anatomy-Constrained Contrastive Learning for Synthetic Segmentation without Ground-truth (MICCAI 2021)

acta-reg-net icon acta-reg-net

An Auto-Context based Tissue-Aware Deformable Registration Network (ACTA-Reg-Net) for Infant Brain MR Images

adhd200 icon adhd200

scripts to process the ADHD200 dataset

aga icon aga

Attribute-Guided Augmentation

anatomysketch-software icon anatomysketch-software

A medical image segmentation software supporting user interventions and user-defined funtion extention

ants icon ants

Advanced Normalization Tools (ANTs)

antspy icon antspy

Advanced Normalization Tools in Python

attention-gated-networks icon attention-gated-networks

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

attributedsbm icon attributedsbm

Fits an attributed stochastic block model for networks with multiple continuous attributes

birl icon birl

BIRL: Benchmark on Image Registration methods with Landmark validations

brain-tissue-segmentation-using-deep-learning-pipeline-neuronet icon brain-tissue-segmentation-using-deep-learning-pipeline-neuronet

This Repository is for the MISA Course final project which was Brain tissue segmentation. we adopt NeuroNet which is a comprehensive brain image segmentation tool based on a novel multi-output CNN architecture which has been trained and tuned using IBSR18 dataset

brainprep icon brainprep

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

brainstools icon brainstools

A suite of tools for medical image processing focused on brain analysis

caffe-heatmap icon caffe-heatmap

Caffe with heatmap regression & spatial fusion layers. Useful for any CNN image position regression task.

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