iddryg Goto Github PK
Name: Ian Dryg
Type: User
Company: Dana-Farber Cancer Institute
Bio: Bioengineering PhD working on spatial biology in immuno oncology.
Twitter: idryg
Location: New York, NY
Name: Ian Dryg
Type: User
Company: Dana-Farber Cancer Institute
Bio: Bioengineering PhD working on spatial biology in immuno oncology.
Twitter: idryg
Location: New York, NY
A modified version of plotEnrichment() from FGSEA. This version takes in two pathways instead of one: an UP and a DOWN -regulated pathway. Both are plotted on the same enrichment plot.
A script to convert every gene name to capitalized first letter, every other letter lowercase. This is to convert a gene set for GSEA. https://www.gsea-msigdb.org/gsea/index.jsp March 2021 - Ian Dryg
Identify neighborhoods based on local cell populations.
Resume / Portfolio for Ian Dryg
Convert from qptiff (and scn?) to ome tiff and remove some metadata.
Using multi-channel microscopy images, calculates the minimum distance between two markers. In this case, it was used to calculate how invasive tumor cells were in lymph nodes by measuring the minimum distance between tumor-positive pixels and pixels positive for a lymphatic vessel marker (LYVE-1).
functions I may want to reuse in R
SamplerBox is a sampler musical instrument based on RaspberryPi.
Some functions for streamlined single cell sequencing analysis.
Vertex Component Analysis in Python
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.