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iGEM Software 2020's Projects

agro-q icon agro-q

Agro-Q is a mobile app used to monitor a hydroponics system wirelessly

clustersy-linkoping icon clustersy-linkoping

ClusteRsy is a user-friendly software for transcriptome analysis and is developed by the Linköping iGEM team 2020.

grenoble_alpes icon grenoble_alpes

Official Repository for the software made by the 2020 Grenoble_ Alpes' Team

groningen icon groningen

The population dynamics models focusing on the Globodera pallida nematode and the bacterial biofilm on the roots.

hannover icon hannover

This repository contains the code for simulating the growth of a Biofilm after attachment using Molecular dynamics simulation methods. The project was build as part of the iGEM 2020 Contest. The BiofilmSimulation software can be installed as A python package, documented under https://pypi.org/project/BiofilmSimulation.

heidelberg_2020 icon heidelberg_2020

Github repository for the iGEM Team Heidelberg 2020 judging release software.

igem2020uppsala icon igem2020uppsala

Where we share and collaborate on the code for the iGem 2020 competion

iiser-pune-india icon iiser-pune-india

Design and development of Peptide drugs against falciparum Malaria and a Deep learning Web App for Malaria Diagnosis

iit_roorkee_india icon iit_roorkee_india

Machine Learning model for detecting Antibiotic Resistance genes and Django based REST API for predicting secondary structure of our novel engineered protein.

imperial_college icon imperial_college

Automated DNA assembly script generation pipeline for Imperial College iGEM Team 2020 (Software Track).

kcl_uk icon kcl_uk

Software created by Renervate, KCL iGEM 2020. Here you can find our scaffold degradation simulation program, and our Grasshopper algorithm 'The Porosifier' - of which adds pores to an arbitrary shape

ku_istanbul icon ku_istanbul

GitHub Repository of iGEM KU_ISTANBUL 2020 Team. This repository is created to present setup scripts of computational models built using Lumerical FDTD software.

optizyme icon optizyme

Optizyme is a software package in R that streamlines the computational modeling and optimization of cell-free biological systems.

rochester icon rochester

Codes for Rochester iGEM team modeling and software

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