illusional Goto Github PK
Name: Michael Franklin
Type: User
Company: @populationgenomics
Bio: Software Engineer at the Centre for Population Genomics
Twitter: illusional_au
Location: Melbourne, Australia
Michael Franklin's Projects
allsorts
ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.
amber
Amber Energy testing
cellregmap
CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq
clihelpparser
Library for reading the output from CLI help commands, and generating machine readable schemas (CWL etc)
containers-bioinformatics-workshop
UNDER CONSTRUCTION -- Workshop on Singularity Containers for Bioinformatics
cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
cwl-format
A very opinionated code formatter for CWL
cwl-svg
A library for generating an interactive SVG visualization of CWL workflows
cwl-utils
Python 3.6+ utilities for CWL
cwl-v1.2
Current development CWL v1.2 specification
cwl-website
www.commonwl.org
cwltool
Common Workflow Language reference implementation
definitelytyped
The repository for high quality TypeScript type definitions.
family_history_terminology
fastqe-convert
Convert files to an emoji format. Thinking of changing the name.
filesystem_spec
A specification that python filesystems should adhere to.
fit3036
Computer Science Project - Road Surface Area Estimation
gridss
GRIDSS: the Genomic Rearrangement IDentification Software Suite
huckleberry
immutable-interval-tree
Immutable Interval Tree for Javascript / Typescript
janis-unix
Unix tools and data types for Janis
media
OpenWDL Media Materials
miniwdl
A static analysis toolkit for the Workflow Description Language
photo-scanning
Scripts to process photo scans
pushup-counter
A simple mobile app to count push-ups
python-cwlgen
Generation of CWL programmatically. Available types: CommandLineTool, Workflow and Requirements
react-nice-dates
A responsive, touch-friendly, and modular date picker library for React.
regional_missense_constraint
Code to calculate regional missense constraint
schema_salad
Semantic Annotations for Linked Avro Data
seqr
web-based analysis tool for rare disease genomics
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