Comments (4)
Ты зря пишешь .skip = 1, это означает, что надо пропустить первую строку, а потом уже начинать парсить названия колонок. Тебе нужен .skip = 0.
Внимательно проверь названия колонок, по-моему, у тебя лишние точки в названиях, тебе нужно указывать точное название колонки из файла (с пробелами, прям как есть)
Я исправил, можешь обновиться до develop ветки
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У тебя получилось? Я бы тогда закрыл issue.
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Обновилась, не получается. в файле названия колонок верны, все совпадает. Skip не меняет дела(
Error тот же.
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Это странно, я загрузил твой файл, и у меня все получилось. Напиши, какой командой ты это делаешь, пожалуйста
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Related Issues (20)
- Problem parsing immunoseq for tcR package -- Error: Error in scan(file = file, what = what, sep = sep, quote = quote, dec = dec, : scan() expected 'an integer', got 'nodata' HOT 1
- parsing mixcr 3.0.3 file HOT 4
- Error when trying to parse data HOT 1
- Issue with name fixes HOT 1
- tcR conflict with other R packages?
- New immunoSEQ files won't parse. HOT 4
- pca.segments.2D
- plot "vis.gene.usage" by "Read.proportion" HOT 1
- V-segments usage plot only shows fixed 50 V?
- Differential abundance calculation? HOT 1
- Skipping files while parsing HOT 1
- Chao1 tcR
- signif.digits in vis.heatmap does not work as espected HOT 1
- importing mixcr dataset HOT 1
- TRBV6-8 and TRBV6-9 absence form the HUMAN_TRBV set HOT 1
- Names of gene segments in tcR HOT 1
- vis.rarefaction Warning: Ignoring unknown aesthetics: Group HOT 1
- Sample names in mixcr input HOT 1
- Cosine similiarity HOT 1
- Parsing immunoseq data for tcR package
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