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Imon's Projects

bertcriticalfinding icon bertcriticalfinding

BERT model to classify radiology report text according to critical, acute and normal.

blob_cropper icon blob_cropper

A small Python package that processes images or videos to produce blob images.

character-bert icon character-bert

Main repository for "CharacterBERT: Reconciling ELMo and BERT for Word-Level Open-Vocabulary Representations From Characters"

clara-train-examples icon clara-train-examples

Example notebooks demonstrating how to use Clara Train to build Medical Imaging Deep Learning models

cnn_txf_bias icon cnn_txf_bias

Study of human inductive biases in CNNs and Transformers.

disentanglement_lib icon disentanglement_lib

disentanglement_lib is an open-source library for research on learning disentangled representations.

ecg_plot icon ecg_plot

Plot standard multi lead ECG/EKG chart with Python

femr icon femr

FEMR (Framework for Electronic Medical Records) provides tooling for large-scale, self-supervised learning using electronic health records

frameextractionmammogram icon frameextractionmammogram

a hybrid information extraction system for unstructured mammography reports. • Generates information frames using dependency parsing and distributed semantics. • Information frames comprise entities and relations that capture imaging observations. • This system obtains a F1-score of 0.94 in extracting complete lesion information. • Outperforms a state-of-the-art rule-based system in generating complete information.

gloria icon gloria

GLoRIA: A Multimodal Global-Local Representation Learning Framework forLabel-efficient Medical Image Recognition

mcat icon mcat

Multimodal Co-Attention Transformer for Survival Prediction in Gigapixel Whole Slide Images - ICCV 2021

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