j-hudecek Goto Github PK

anonymize-slide

Delete the label from a whole-slide image

beacon-ui-elixir

Web interface of the elixir beacon

cbioportal

dalliance-plugin

guesv

C# library for loading csv, tsv or other regularly shaped files guess-separated-values.

hmftools

Various utility tools for working with genomics data

j-hudecek.github.io

crossroad

jquery-resizable

A small jQuery plug-in to make DOM components resizable

openseadragon

An open-source, web-based viewer for zoomable images, implemented in pure JavaScript.

openseadragon-annotations

Draw/erase annotations, measure and add info bubbles over deep zoom images

openslide

C library for reading virtual slide images

openslidecs

OpenSlide API C# interop with DeepZoom support

proteinccd

Java code for Protein Crystallographic Construct Designer

qupath

Quantitative Pathology

rmodules

A R statistical analysis module plugin for tranSMART

simple.data

A light-weight, dynamic data access component for C# (.NET core 2.1 / SqlServer)

slidescore-api

Python utilities to interface with SlideScore

tm2cbio

Utility to translate tranSMART export files to a directory ready for import to cBioPortal

transmart-core-api

transmart-core-db

Implementation of transmart-core-api for PostgreSQL/Oracle/H2

transmart-data

Tools for managing tranSMART's database

transmart-etl

tranSMART ETL pipelines and configurations

transmart-loader

tranSMART import functionality implemented in Groovy

transmart-mydas

transmartapp

tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.

tus-dotnet-client

tus.io Client for .Net

valetudo

Open source cloud replacement for vacuum robots enabling local-only operation