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Jonathan Armond's Projects

bioformats icon bioformats

Bio-Formats is a Java library for reading and writing data in life sciences image file formats. It is developed by the Open Microscopy Environment. Bio-Formats is released under the GNU General Public License (GPL); commercial licenses are available from Glencoe Software.

celldb icon celldb

Matlab front-end for cell analysis management system backed by SQL DB

cl-simd icon cl-simd

SSE intrinsics implementation for ECL & SBCL

cl-sugar icon cl-sugar

Syntactic sugar for Common Lisp inspired by modern languages

curves icon curves

Python software for analyzing AFM force curve data.

os1 icon os1

Basic operating system for self-learning purposes

stamm icon stamm

State Transitions using Aggregated Markov Models

u-track icon u-track

Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection failure, and (3) capture particle merging and splitting events resulting from occlusion or genuine aggregation and dissociation events

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