Name: Jenny Leopoldina Smith
Type: User
Company: Seattle Children's
Bio: Computational Biologist, senior, at Seattle Children's Research Institute.
Location: Seattle, WA
Bioinformatician and R programmer applying methods in data science to biomedical research questions with expertise in genomics and next generation sequencing (NGS) data.
alpine_climb_beta_sheet
Alpine climbing beta sheets
aws-batch-helpers
AWS Batch helpers is a collection of scripts and tools that can be used with AWS Batch.
batch_pipeline
Example workflows for a multi-step array job on AWS Batch
biods-bootcamp
A repo for new interns learning the basics of biomedical data science
biof309_project
blogdown_site
R-Ladies Seattle Site
bookclub-islr
Introduction to Statistical Learning Using R Book Club
bulk_rnaseq_fusion_nf
RNA-seq fusion detection pipeline with STAR aligner, STAR-Fusion, Fusion-Inspector, and CICERO fusion.
cowsay-test
cutandrun_nf
Cut&Run Alignment, QC, and Peak Calling Pipeline
denovo_mrna_assembly
fusbreakpoint
R package for Sequence Search in BAM files using R Bioconductor
homopolymersrnaeq
intermediate_git
Presentation on intermediate git and github for Rladies Seattle
introtor
isoseq3
isoseq3_workflow
workflow for Isoseq3
jennylsmith
jennylsmith.github.io
reciprocalbesthits
An all-against-all BLASTp search in teleost species
rnaseq_count_nf
rnaseq_kegg_heatmaps
rnaseq_smearplot_vennd
sarek
Analysis pipeline to detect germline or somatic variants from WGS / targeted sequencing
star-fusion-nf
STAR-fusion run on AWS Batch using Nextflow workflow manager.
tg-wdl-rnaseqvariantcalling
WDL workflow for variant calling from bulk RNA seq for a region of interest using GATK tools. @vortexing for questions
tidy_models
survival analysis with R tidymodels presentation for RLadies Seattle
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
