jessicascarborough Goto Github PK

432-2021

Public repository for the 432 course (PQHS 432, CRSP 432 and MPHP 432) to be led in Spring 2021 by Professor Thomas E. Love at Case Western Reserve University.

cell-line-corr-sybb459

cissig

The public repository including all code to recreate the analysis and figures from, "Exploiting convergent evolution to derive a pan-cancer cisplatin sensitivity gene expression signature."

collateralsensitivityrepeatability

Exploring the repeatability of collateral sensitivity

del-chr7-analysis

es-cs-evolution

gard_meta-analysis

gdsc-gene-drug-corr

hnmdrp

A novel heterogeneous network-based method for drug response prediction in cancer cell lines

lotr-cluster

oligo-null

Scripts exploring how effective intervention in patients with oligometastasis can be based on growth rate and timing of treatment.

oligomet-null-hypothesis

Code examining tumor growth models and how varying parameters affects treatment outcomes in the setting of oligometastasis.

plot-conf-twitterverse

Script for plotting conference hashtag metrics

rsi-mutation

A repository for cleaning TCC mutational data and creating figure showing association between RSI and gene mutations.

sbrt-src-surv

scarborough-academic

scarborough-data-sim

Data simulation project for HS 616. This project interests the use of touchscreens by infants and the resulting sleep problems.

stochastic-modeling

Some code to work through modeling the moran process, including population changes, time to fixation, and fixation probability.

uv-ppe-mapping

violin-cisplatin-signature

This repository contains the code necessary to plot the Theory Division Cisplatin Sensitivity Signature across TCGA cancer subgroups.